BLNK
Primary Info
Mutation
Mouse studies
DNA sequencing


Click on each title for more information
I. DNA amplification
Kit
GE:illustra GenomiPhi V2 DNA Amplification Kit

II. PCR
Primer details
Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by ePCR with
the primer
1 AGGCTTACCATGCTGCTCCCT CCCTAAAAGCTCAGTCCAC 286bp chr10:98030959-98031244
2 CAGTCATGCTTCTCCTTCGCT CCTGGCCACCATGGATTCCA 407bp chr10:98006585-98006991
3 GCATCGGCTTTGACCATCA TAGCGTATTTCCCTTTCCATA 201bp chr10:98002403-98002603
4 GTGCGAAATGTGTGTGGATG CGGCTGACCACCAGCATGTA 216bp chr10:97990456-97990671
5 AACCTCTCCAAGCCTTGTCTC GGATCCTCGAAGGTCATTG 693bp chr10:97986747-97987439
6a TTTCTGGATCTCAATGGCT GGACTTGAGGTTTCTGCA 212bp chr10:97983614-97983825
6b ATTCCCCACCCTTCAGCA GGCAGTCAATAGCAGGTT 256bp chr10:97983469-97983724
7 TCACTCCCTCCCATACAGTCA GTGCTTACTACCAAATACTC 229bp chr10:97976331-97976559
8 CTCTGGTCTGGTCATCAT ATGAGGATGAGGACTGGC 315bp chr10:97974944-97975258
9 AGCCTCAGTGTGAGCATCAG GGAGAACTTCTAATGAAGTCAACAGG 228bp chr10:97969503-97969730
10 CCTGCAAGGATAGTCTTCTACAC GCTGTGTTCACCATAGCTGG 264bp chr10:97967526-97967789
11 CATCAAAGAAAAGTGCTGCC CATGCTGAGGTTCTGAGCTAGT 330bp chr10:97966587-97966916
12 GACATGTTCCCGGGAAGACT CCTAGCACTGCAAGTCAGTGTCA 303bp chr10:97964188-97964490
13 GATGTGCCTGTTCACAGCATCA GGAGAAGATGCCAGGATAACGCA 249bp chr10:97963691-97963939
14 CCCTGGCAGCACCTAGTACA CAACAACTGGGTATTCTGTCCCT 337bp chr10:97960572-97960908
15 AATGCAAATGGGTCTTTGTTTC CTCCAGTGAAACTGCATCATC 252bp chr10:97959750-97960001
16 TTGGAATGTAATATAGGTGTTCTTCAC TTGGAGGTCTGGAACTTGAC 603bp chr10:97956318-97956920
17 GATGGGAGGAGTGGAGCTCA CCACTTCAATAGCTGACTCCATCT 331bp chr10:97951588-97951918

III. Sequencing reaction
Kit
BigDye® Terminator v3.1 Cycle Sequencing Kit
Primer details
Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by ePCR with
the primer
1 AGGCTTACCATGCTGCTCCCT CCCTAAAAGCTCAGTCCAC 286bp chr10:98030959-98031244
2 CAGTCATGCTTCTCCTTCGCT CCTGGCCACCATGGATTCCA 407bp chr10:98006585-98006991
3 GCATCGGCTTTGACCATCA TAGCGTATTTCCCTTTCCATA 201bp chr10:98002403-98002603
4 GTGCGAAATGTGTGTGGATG CGGCTGACCACCAGCATGTA 216bp chr10:97990456-97990671
5 AACCTCTCCAAGCCTTGTCTC GGATCCTCGAAGGTCATTG 693bp chr10:97986747-97987439
6a TTTCTGGATCTCAATGGCT GGACTTGAGGTTTCTGCA 212bp chr10:97983614-97983825
6b ATTCCCCACCCTTCAGCA GGCAGTCAATAGCAGGTT 256bp chr10:97983469-97983724
7 TCACTCCCTCCCATACAGTCA GTGCTTACTACCAAATACTC 229bp chr10:97976331-97976559
8 CTCTGGTCTGGTCATCAT ATGAGGATGAGGACTGGC 315bp chr10:97974944-97975258
9 AGCCTCAGTGTGAGCATCAG GGAGAACTTCTAATGAAGTCAACAGG 228bp chr10:97969503-97969730
10 CCTGCAAGGATAGTCTTCTACAC GCTGTGTTCACCATAGCTGG 264bp chr10:97967526-97967789
11 CATCAAAGAAAAGTGCTGCC CATGCTGAGGTTCTGAGCTAGT 330bp chr10:97966587-97966916
12 GACATGTTCCCGGGAAGACT CCTAGCACTGCAAGTCAGTGTCA 303bp chr10:97964188-97964490
13 GATGTGCCTGTTCACAGCATCA GGAGAAGATGCCAGGATAACGCA 249bp chr10:97963691-97963939
14 CCCTGGCAGCACCTAGTACA CAACAACTGGGTATTCTGTCCCT 337bp chr10:97960572-97960908
15 AATGCAAATGGGTCTTTGTTTC CTCCAGTGAAACTGCATCATC 252bp chr10:97959750-97960001
16 TCTTCACAAAATGATTTTTTGAACCTGT TTGGAGGTCTGGAACTTGAC 583bp chr10:97956318-97956900
17 GATGGGAGGAGTGGAGCTCA CCACTTCAATAGCTGACTCCATCT 331bp chr10:97951588-97951918

IV. Ethanol precipitation

V. Sequencing analysis